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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18496099_18498437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18496099 - 18498437

Intron Length:

2339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

CCGCCCCTAACG

Flanking Amino Acid:

VGIAYNARIGGIRMLDGDVT

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

80.2

0.68

0.8

77.9

36.6

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

49.9

-0.1

1.9

53.3

47.1

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916