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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18498527_18498862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18498527 - 18498862

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACGTTAA

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GTCTGCTGACGG

Flanking Amino Acid:

TPRYDASNENKHGTRCAGEV

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

74.1

32.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

40.2

-1.1

48.5

42.1

Minor BPS

39.5

-0.9

2.3

44.32

47.3

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916