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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18499857_18503019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18499857 - 18503019

Intron Length:

3163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGC

5'SS Class:

major

3'SS Sequence:

CGTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACGAA

U12 Branch Point Sequence:

GCCTCCCGAAAC

Flanking Amino Acid:

MDPKVDWLQQQEVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

67.5

37.8

Major BPS

44.5

-0.3

1.1

36.5

30.8

Major PPT

73.1

0.52

65.3

41.1

Minor 5ss

28.2

-2.5

3.7

40.6

Minor BPS

46.3

-0.3

1.9

54.27

42.9

Associated Gene:

Gene:

PCSK6

Ensembl Gene ID:

ENSAPLG00000005333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005545

18483116 - 18503031

19916