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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18522859_18526878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18522859 - 18526878

Intron Length:

4020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GGTGCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTGAT

U12 Branch Point Sequence:

ATTCCTTTTCCC

Flanking Amino Acid:

MEQDTKEEVSEKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

76.8

33.7

Major BPS

59.9

0.25

1.2

51.1

44.3

Major PPT

70.8

0.47

62.2

39.8

Minor 5ss

31.3

-2.1

2.7

33.6

35.4

Minor BPS

41.9

-0.6

3.5

66.24

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023814

18522850 - 18547583

24734