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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18527032_18533523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18527032 - 18533523

Intron Length:

6492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATGATAATT

Flanking Amino Acid:

KTQLVVFEDEDEQKCIETVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

35.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

78.6

0.64

0.7

72.5

25.6

Minor 5ss

43.1

-0.8

56.5

47.9

Minor BPS

46.1

-0.2

2.2

68.73

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023814

18522850 - 18547583

24734