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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18542686_18545097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18542686 - 18545097

Intron Length:

2412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

AGAAATTGAAAA

Flanking Amino Acid:

RPPTRSHLKEAAKSTSDGIL

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.4

-0.5

1.6

48.15

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023814

18522850 - 18547583

24734