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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18565541_18568492_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18565541 - 18568492

Intron Length:
2952

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCC|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
GTCTCTGCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TCTGTTTTAATG

Flanking Amino Acid:
GDELASEADTLLHSEKEFHD

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.9
0.31
1.3
54.4
44.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.4
0.57
0.9
69.1
37

Minor 5ss
28.5
-2.5
3.1
35.7
41.3

Minor BPS
61.1
0.21
1.5
61.64
41.7

Associated Gene:

Gene:
ANKDD1A

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18565507 - 18573230
7724