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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1856925_1857606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1856925 - 1857606

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATT

Flanking Amino Acid:

GHGFPKPGGKDKAIHNRQLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.7

0.74

0.8

75.5

38.4

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

74.6

0.85

82.48

32.6

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195