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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18579356_18579672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18579356 - 18579672

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TCAGCGTTAATT

Flanking Amino Acid:

RSAEVNLYIQIHLLQFRGTR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

79.1

0.66

0.9

72.2

37.9

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

54.1

0.21

2.2

72.09

45.3

Associated Gene:

Gene:

SPG21

Ensembl Gene ID:

ENSAPLG00000014668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037897

18579057 - 18583464

4408

ENSAPLT00000015314

18579057 - 18587220

8164