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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18579814_18579980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18579814 - 18579980

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TCAGAATTAACT

Flanking Amino Acid:

IRDVPVTIMDVFDQSALSTE

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

0.47

0.8

65.3

35.7

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

52.1

0.15

1.9

71.09

45.2

Associated Gene:

Gene:

SPG21

Ensembl Gene ID:

ENSAPLG00000014668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037897

18579057 - 18583464

4408

ENSAPLT00000015314

18579057 - 18587220

8164