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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18580089_18580571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18580089 - 18580571

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

TCTCTACTGAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATGTTGTTAACC

Flanking Amino Acid:

ADGIDFMVDRLESLGQSELA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

72.7

38.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

61.8

0.27

1.1

63.6

36.3

Minor 5ss

35.4

-1.7

3.5

43.2

44.5

Minor BPS

60.6

0.31

2.1

71.97

39.5

Associated Gene:

Gene:

SPG21

Ensembl Gene ID:

ENSAPLG00000014668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037897

18579057 - 18583464

4408

ENSAPLT00000015314

18579057 - 18587220

8164