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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18580681_18581224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18580681 - 18581224

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GATGCTTGAAGA

Flanking Amino Acid:

SIFNQTWTANSFWLMPAFML

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

85.8

0.8

0.7

85.1

29.7

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

48.1

-0.1

1.8

57.95

41.5

Associated Gene:

Gene:

SPG21

Ensembl Gene ID:

ENSAPLG00000014668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015314

18579057 - 18587220

8164

ENSAPLT00000037897

18579057 - 18583464

4408