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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18581371_18581969_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18581371 - 18581969

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTAATTGAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATT

Flanking Amino Acid:

KLLDHLQLDKVHLFGASLGG

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

56.6

0.15

1.1

43.4

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

69.2

0.68

1.6

87.82

31.2

Associated Gene:

Gene:

SPG21

Ensembl Gene ID:

ENSAPLG00000014668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037897

18579057 - 18583464

4408

ENSAPLT00000015314

18579057 - 18587220

8164