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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1858619_1859674_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1858619 - 1859674

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTAT

5'SS Class:

weak_major

3'SS Sequence:

GTAATCCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TAAACTGTAATC

Flanking Amino Acid:

TKGGLDYKFQDDPDGLHQLD

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.5

37.4

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

70.6

0.46

0.9

66.9

40.1

Minor 5ss

55.9

0.2

2.4

73.2

43.6

Minor BPS

49.2

-0

60.94

38.5

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195