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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1859818_1860943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1859818 - 1860943

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

AATATTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TATTCTATAAGT

Flanking Amino Acid:

IVSKLLSLGLITESQAYTLE

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

80.8

31.6

Major BPS

60.7

0.27

65.3

28.1

Major PPT

71.9

0.49

66.5

43.1

Minor 5ss

42.1

-0.9

2.8

56.5

35.6

Minor BPS

61.5

0.44

1.9

82.03

39.3

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195