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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1861106_1861418_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1861106 - 1861418

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTCT

5'SS Class:

major

3'SS Sequence:

GTCTTTTGTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGCTCATTGATT

Flanking Amino Acid:

DTKENQQEKMTSSKTDQDSF

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.2

0.19

1.8

68.5

42.1

Minor 5ss

-0.8

2.8

56.8

42.6

Minor BPS

62.8

0.48

1.6

77.01

39.7

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195