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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1861597_1863473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1861597 - 1863473

Intron Length:

1877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

ACCCCTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTGCTTTAACC

Flanking Amino Acid:

FYALLKSLNSETEMKEKETL

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

80.2

30.7

Major BPS

77.3

0.68

79.3

29.4

Major PPT

63.8

0.31

0.9

57.1

31.7

Minor 5ss

-0.9

55.3

48.9

Minor BPS

80.9

0.95

1.2

85.93

32.4

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195