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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18676564_18676899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18676564 - 18676899

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTTTCTGTAACT

Flanking Amino Acid:

ANYNVEKAQQGIVFLDEVDK

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.1

41.1

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

74.3

0.55

0.9

67.3

38.1

Minor 5ss

43.2

-0.8

3.3

64.9

46.4

Minor BPS

74.9

0.86

1.9

95.57

31.2

Associated Gene:

Gene:

CLPX

Ensembl Gene ID:

ENSAPLG00000014863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015511

18591048 - 18681292

90245