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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18679659_18680786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18679659 - 18680786

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCGTTTTAATT

Flanking Amino Acid:

VEGKKEPGYIRAPTKDSSEE

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

0.9

70.8

38.9

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

67.4

0.63

1.3

78.3

39.3

Associated Gene:

Gene:

CLPX

Ensembl Gene ID:

ENSAPLG00000014863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015511

18591048 - 18681292

90245