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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18707208_18707781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18707208 - 18707781

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

ATCCCATTAACT

Flanking Amino Acid:

VGTPAPDRYLWYHNGSLLDP

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

69.5

0.49

71.3

30.3

Major PPT

0.58

0.9

72.7

32.1

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

67.8

0.64

1.6

81.49

39.5

Associated Gene:

Gene:

CILP

Ensembl Gene ID:

ENSAPLG00000026330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030221

18704069 - 18713322

9254

ENSAPLT00000046645

18704069 - 18712122

8054