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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18707891_18707993_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18707891 - 18707993

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCCTG

5'SS Class:

weak_major

3'SS Sequence:

CCTTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAGAA

U12 Branch Point Sequence:

ATAAGACTAACG

Flanking Amino Acid:

LALQVRLQRSGKPYIVKSPD

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

54.5

49.7

Major BPS

56.1

0.15

52.7

34.2

Major PPT

79.5

0.66

0.8

31.9

Minor 5ss

45.6

-0.5

3.2

64.4

Minor BPS

41.4

-0.7

2.2

49.92

43.1

Associated Gene:

Gene:

CILP

Ensembl Gene ID:

ENSAPLG00000026330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030221

18704069 - 18713322

9254

ENSAPLT00000046645

18704069 - 18712122

8054