Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18709624_18710522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18709624 - 18710522

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTCCC

5'SS Class:

major

3'SS Sequence:

GATGTTATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

GTGTCAGTAACA

Flanking Amino Acid:

GAPTFAYARHSPLVQDSKRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

54.9

42.7

Major BPS

72.5

0.56

1.2

63.4

Major PPT

61.6

0.26

1.2

57.6

46.4

Minor 5ss

36.6

-1.5

3.1

39.3

Minor BPS

51.6

0.05

2.3

69.37

42.6

Associated Gene:

Gene:

CILP

Ensembl Gene ID:

ENSAPLG00000026330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030221

18704069 - 18713322

9254