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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18724996_18725596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18724996 - 18725596

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TTCTCGATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCCTTCTTATTT

Flanking Amino Acid:

AGSVLLAAPQLFLFHLHTVP

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.6

0.69

0.9

77.5

35.4

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

56.8

0.29

1.6

67.46

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018531

18724412 - 18726594

2183