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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1876940_1878694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1876940 - 1878694

Intron Length:

1755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAAAAT

5'SS Class:

major

3'SS Sequence:

TCCTTTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCATCCTTTACT

Flanking Amino Acid:

NAAGNSEEPRGKTEAYLEAI

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.2

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

77.4

0.62

0.8

70.4

Minor 5ss

33.4

-1.9

3.3

48.6

47.1

Minor BPS

74.1

0.84

1.6

85.07

41.2

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195