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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1883254_1884803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1883254 - 1884803

Intron Length:

1550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAATTAAA

5'SS Class:

major

3'SS Sequence:

CTTATTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTT

Flanking Amino Acid:

KGILDKEEADHIWTERWMRR

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

78.1

30.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.3

0.73

0.8

80.7

31.2

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

68.8

0.67

1.6

82.89

39.2

Associated Gene:

Gene:

SCG3

Ensembl Gene ID:

ENSAPLG00000003099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003174

1856688 - 1884882

28195