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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18851661_18852320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18851661 - 18852320

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

GAGAAGTCAACT

Flanking Amino Acid:

MCASFRNSKQREALPGLDSQ

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

0.23

1.1

61.4

36.2

Major PPT

83.3

0.75

0.8

81.6

30.5

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

41.3

-0.5

2.3

56.45

44.9

Associated Gene:

Gene:

IGDCC4

Ensembl Gene ID:

ENSAPLG00000013127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013708

18843692 - 18868007

24316