About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18949766_18951625_R

Intron Information:

Intron Rank:
16
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
18949766 - 18951625
Intron Length:
1860

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTATGTTCG
5'SS Class:
major
3'SS Sequence:
GTTGCATTTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATAAAT
U12 Branch Point Sequence:
GTATATATAAAT
Flanking Amino Acid:
ALMQRSDIFRVAVAGAPVTL
Intron Amino Acid Position:
774

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.1
0.64
1
65
41.7
Major BPS
74.5
0.61
1
79.6
29.1
Major PPT
77.2
0.61
0.9
69.9
40.4
Minor 5ss
46.2
-0.4
2.4
50.5
45.8
Minor BPS
48.7
-0
1.9
69.41
40.5

Associated Gene:

Gene:
DPP8
Ensembl Gene ID:
ENSAPLG00000013345
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013950
18948106 - 18968076
19971