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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18954498_18955329_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
18954498 - 18955329
Intron Length:
832

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAT|GTAAGTATC
5'SS Class:
strong_major
3'SS Sequence:
TTGTTTTTGACAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATTGAG
U12 Branch Point Sequence:
TTGTTTTTGACA
Flanking Amino Acid:
WEVLGRHGSNIYVDEAKKLV
Intron Amino Acid Position:
529

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
86.5
0.86
0.9
87.3
27
Major BPS
64.6
0.36
1.5
63.4
44.3
Major PPT
82
0.72
1
79.9
37.7
Minor 5ss
42.7
-0.8
2.8
59.4
38.1
Minor BPS
72.3
0.7
1.1
77.15
33.9

Associated Gene:

Gene:
DPP8
Ensembl Gene ID:
ENSAPLG00000013345
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013950
18948106 - 18968076
19971