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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18959703_18960712_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
18959703 - 18960712
Intron Length:
1010

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGA|GTAAGTTCC
5'SS Class:
major
3'SS Sequence:
GCTTTGTCAACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GGTTCAT
U12 Branch Point Sequence:
TGTCACTGAATT
Flanking Amino Acid:
SEVTINAEGRIADVVDKELV
Intron Amino Acid Position:
356

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76
0.61
1
69.5
36.3
Major BPS
67
0.42
1.4
71.4
45.1
Major PPT
71.1
0.47
1
65.7
39.9
Minor 5ss
42.7
-0.8
2.7
50.7
39.7
Minor BPS
58.8
0.35
1.7
76.83
39

Associated Gene:

Gene:
DPP8
Ensembl Gene ID:
ENSAPLG00000013345
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013950
18948106 - 18968076
19971