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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18963314_18964536_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
18963314 - 18964536
Intron Length:
1223

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAATGAAT
5'SS Class:
major
3'SS Sequence:
TGTCTTTTTTTAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AACTAAT
U12 Branch Point Sequence:
ACATCATGAACT
Flanking Amino Acid:
EERRLTFVHNELANVEEDPK
Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.4
0.58
1
73.2
37
Major BPS
77.9
0.69
0.8
75.9
25
Major PPT
85.7
0.8
0.7
84.8
30
Minor 5ss
34.1
-1.8
3.3
45.5
43.8
Minor BPS
58.3
0.34
1.8
73.92
42.1

Associated Gene:

Gene:
DPP8
Ensembl Gene ID:
ENSAPLG00000013345
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013950
18948106 - 18968076
19971