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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18972493_18973953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18972493 - 18973953

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTTTTGTTGATG

Flanking Amino Acid:

IEFLEPVEPKPVCRVTQRQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

84.6

33.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.3

0.53

0.9

69.8

36.6

Minor 5ss

-0.9

3.2

59.7

39.1

Minor BPS

49.7

-0.1

2.1

61.06

41.9

Associated Gene:

Gene:

HACD3

Ensembl Gene ID:

ENSAPLG00000013863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014464

18970791 - 18980610

9820