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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18974119_18975102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18974119 - 18975102

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCATCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

TTATCCTTCATC

Flanking Amino Acid:

SDAEMELREKEEEKISKMKI

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

0.42

1.1

38.5

Major PPT

69.1

0.43

31.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

70.5

0.63

1.7

79.12

36.5

Associated Gene:

Gene:

HACD3

Ensembl Gene ID:

ENSAPLG00000013863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014464

18970791 - 18980610

9820