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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18976988_18977520_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18976988 - 18977520

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGGG

5'SS Class:

major

3'SS Sequence:

GAATTGGCTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTCTAACA

Flanking Amino Acid:

FYFWSIIELFRYPYYMLSCI

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

60.9

43.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

59.9

0.22

55.3

45.2

Minor 5ss

34.5

-1.8

2.9

41.3

45.1

Minor BPS

63.1

0.41

1.6

77.1

33.3

Associated Gene:

Gene:

HACD3

Ensembl Gene ID:

ENSAPLG00000013863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014464

18970791 - 18980610

9820