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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18983834_18984178_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18983834 - 18984178

Intron Length:
345

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGACA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTCTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCTAT

U12 Branch Point Sequence:
TTTTTTCTATTT

Flanking Amino Acid:
TVWIKPSGLQTDVQKILRNA

Intron Amino Acid Position:
414

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.5
0.72
1
74.2
35.8

Major BPS
73.8
0.59
1.3
72.8
43

Major PPT
96
1.03
0.5
92.7
17.1

Minor 5ss
32.6
-2
3.1
41.2
44.8

Minor BPS
54.8
0.23
1.9
79.65
37.1

Associated Gene:

Gene:
INTS14

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18980483 - 18992301
11819

18981945 - 18992301
10357