About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_18984904_18986468_R

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
18984904 - 18986468
Intron Length:
1565

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAAGCAAA
5'SS Class:
strong_major
3'SS Sequence:
TTTCCTTCCTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTATTTTCATGT
Flanking Amino Acid:
HLVLPIALNREGDEVGPGIT
Intron Amino Acid Position:
281

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.1
0.97
0.8
83.2
30.8
Major BPS
100
1.24
0.5
100
0
Major PPT
85.7
0.8
0.6
84.7
23
Minor 5ss
38.7
-1.3
2.8
48.1
47.6
Minor BPS
46.6
-0.1
2
68.14
43.1

Associated Gene:

Gene:
INTS14
Ensembl Gene ID:
ENSAPLG00000014064
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000037713
18981945 - 18992301
10357
ENSAPLT00000014696
18980483 - 18992301
11819