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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18986562_18987357_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18986562 - 18987357

Intron Length:
796

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACATTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCCCCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTAGACTTAAAC

Flanking Amino Acid:
IDPIPKAINTDLEIVGFVDI

Intron Amino Acid Position:
250

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.7
0.72
1.1
81.6
33.2

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
85.9
0.81
0.7
81
24.3

Minor 5ss
49.4
-0
2.9
73.9
42.6

Minor BPS
59.2
0.27
1.7
69.86
40.9

Associated Gene:

Gene:
INTS14

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18981945 - 18992301
10357

18980483 - 18992301
11819