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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18988033_18988495_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18988033 - 18988495

Intron Length:
463

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGATGCCT

5'SS Class:
major

3'SS Sequence:
CATGCTTGTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAC

U12 Branch Point Sequence:
GAAAGCTTAACA

Flanking Amino Acid:
YVMCMANLEELQSTDSLDCL

Intron Amino Acid Position:
163

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1
65
40.5

Major BPS
81.3
0.78
0.8
83.4
26.1

Major PPT
70.9
0.47
1
64.3
41.2

Minor 5ss
28
-2.5
3.2
39.9
45.7

Minor BPS
56
0.19
1.8
63.53
41.9

Associated Gene:

Gene:
INTS14

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18980483 - 18992301
11819

18981945 - 18992301
10357