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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18988652_18990446_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18988652 - 18990446

Intron Length:
1795

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TCTCTCCTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
CTCTCCTTTAAG

Flanking Amino Acid:
QEWGAAIPCQVVLVTDGCLG

Intron Amino Acid Position:
111

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.6
0.91
0.8
80.5
35

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
75.6
0.58
1
79.3
26.6

Minor 5ss
49.9
-0
2.4
66.4
45.1

Minor BPS
54.9
0.01
1.9
60.46
46.9

Associated Gene:

Gene:
INTS14

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18981945 - 18992301
10357

18980483 - 18992301
11819