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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18997011_18998062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18997011 - 18998062

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTC

5'SS Class:

major

3'SS Sequence:

TGTTTGCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

ATGGCATTCAGT

Flanking Amino Acid:

QAASAEHIRKKSSGAVADDG

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

72.1

39.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

76.2

0.59

70.3

40.4

Minor 5ss

32.2

-2

3.4

43.7

44.1

Minor BPS

43.6

-0.4

2.3

62.94

Associated Gene:

Gene:

SLC24A1

Ensembl Gene ID:

ENSAPLG00000014168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014757

18996087 - 19008895

12809