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Intron Name: Anas_platyrhynchos_platyrhynchos_11_18998777_19003953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18998777 - 19003953

Intron Length:

5177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTCACA

Flanking Amino Acid:

MIHTLDPLAGAKFKDKVDIL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

81.5

0.71

0.8

76.1

31.3

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

60.9

0.34

2.1

76.36

40.9

Associated Gene:

Gene:

SLC24A1

Ensembl Gene ID:

ENSAPLG00000014168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014757

18996087 - 19008895

12809