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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19014005_19014272_R


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19014005 - 19014272

Intron Length:
268

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TTTATTTCTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
GTCTTTTTATTT

Flanking Amino Acid:
VALGRDNIDIDAFDREYKMA

Intron Amino Acid Position:
1834

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.2
1.16
0.6
97
9.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
89.4
0.89
0.7
84.4
30.5

Minor 5ss
46.1
-0.4
2.8
66.9
44.4

Minor BPS
57.7
0.32
1.6
71.36
40.7

Associated Gene:

Gene:
DENND4A

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19013868 - 19052701
38834

19013868 - 19052701
38834