Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19015674_19016172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19015674 - 19016172

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TAATGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTCTTACAG

Flanking Amino Acid:

QSQNRTLLFETQKYPMVHLL

Intron Amino Acid Position:

1741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

35.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.4

0.68

0.9

77.3

41.3

Minor 5ss

34.4

-1.8

3.4

45.6

43.6

Minor BPS

57.3

0.09

1.8

65.06

42.6

Associated Gene:

Gene:

DENND4A

Ensembl Gene ID:

ENSAPLG00000014243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045937

19013868 - 19052701

38834