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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19079941_19086292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19079941 - 19086292

Intron Length:

6352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGCCC

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGGAATCTAATT

Flanking Amino Acid:

RDDEYDYLFKVVLIGDSGVG

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

88.1

0.86

0.6

84.9

22.8

Minor 5ss

36.5

-1.5

3.5

51.8

44.9

Minor BPS

46.6

-0.1

1.8

63.17

41.1

Associated Gene:

Gene:

RAB11A

Ensembl Gene ID:

ENSAPLG00000014962

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021226

19079346 - 19094797

15452

ENSAPLT00000015608

19078681 - 19095667

16987