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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19122288_19122440_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19122288 - 19122440

Intron Length:
153

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGTGA

5'SS Class:
major

3'SS Sequence:
TTACTTTTAACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTATGAA

U12 Branch Point Sequence:
TTACTTTTAACA

Flanking Amino Acid:
PGFKGIRCDQAALMMEELNP

Intron Amino Acid Position:
800

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.1
0.47
1.1
60.1
41.3

Major BPS
75.5
0.63
1
66
40.9

Major PPT
80.3
0.68
0.9
77.1
35.6

Minor 5ss
34.4
-1.8
3.5
47.2
48.2

Minor BPS
72.9
0.72
1.1
77.26
33

Associated Gene:

Gene:
MEGF11

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19100046 - 19290179
190134

19100046 - 19290179
190134