Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19148093_19148496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19148093 - 19148496

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATATTTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTGTTTATAT

Flanking Amino Acid:

QGEYCDQPCPDGTYGLNCSE

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.3

73.1

43.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

64.8

0.33

1.2

68.2

41.7

Minor 5ss

41.2

-1

2.8

56.1

41.3

Minor BPS

55.1

0.24

2.1

80.79

41.2

Associated Gene:

Gene:

MEGF11

Ensembl Gene ID:

ENSAPLG00000015095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038565

19100046 - 19290179

190134

ENSAPLT00000015745

19100046 - 19290179

190134