About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19384684_19385215_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19384684 - 19385215

Intron Length:
532

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAGTAG

5'SS Class:
major

3'SS Sequence:
CCCTTATTAAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAC

U12 Branch Point Sequence:
AACTCTTTAACG

Flanking Amino Acid:
ADTTGDPMPTGKVVGIIQKN

Intron Amino Acid Position:
327

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1
69
38.3

Major BPS
80.9
0.77
0.8
81.7
25.4

Major PPT
62
0.27
1.1
63.5
35

Minor 5ss
35.4
-1.7
3.3
45.9
49.3

Minor BPS
71.4
0.53
1.3
66.77
41.1

Associated Gene:

Gene:
DIS3L

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19374858 - 19391589
16732