Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19387979_19388655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19387979 - 19388655

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

DICSLLSGVDRYAVSVLWEL

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.8

0.8

0.9

91.3

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

DIS3L

Ensembl Gene ID:

ENSAPLG00000015294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015964

19374858 - 19391589

16732