About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_19389191_19389592_F

Intron Information:

Intron Rank:
14
Intron Class:
major-like
Intron Phase:
2
Intron Coordinates:
19389191 - 19389592
Intron Length:
402

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTACCTTTT
5'SS Class:
weak_major
3'SS Sequence:
ACTTTTTTGACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATTAAC
U12 Branch Point Sequence:
ACTTTTTTGACA
Flanking Amino Acid:
ASAKGFPIDTRSNKTLAESL
Intron Amino Acid Position:
714

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
66.6
0.39
1.2
70.2
42.8
Major BPS
73.1
0.57
0.9
73.7
27.1
Major PPT
79.2
0.66
1
76
37.4
Minor 5ss
53.9
0.13
2.8
75.7
40.2
Minor BPS
68.5
0.57
1.1
71.39
34.7

Associated Gene:

Gene:
DIS3L
Ensembl Gene ID:
ENSAPLG00000015294
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015964
19374858 - 19391589
16732