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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19420932_19423096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19420932 - 19423096

Intron Length:

2165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

GTTTATTTTACA

Flanking Amino Acid:

KPSGLIMARKLIHLEIKPAI

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

86.2

0.82

0.8

80.1

37.1

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

59.2

0.28

1.8

73.14

38.1

Associated Gene:

Gene:

MAP2K1

Ensembl Gene ID:

ENSAPLG00000015480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016177

19405064 - 19441233

36170