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Intron Name: Anas_platyrhynchos_platyrhynchos_11_19452384_19452535_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
19452384 - 19452535

Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGCGGGAC

5'SS Class:
major

3'SS Sequence:
CGTTTTGTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGGTGAT

U12 Branch Point Sequence:
AAGTAGGTGATG

Flanking Amino Acid:
AGTELYRELLRVYEEGKKSI

Intron Amino Acid Position:
51

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.3
0.38
1.1
55
38.4

Major BPS
57.3
0.18
1.3
48.8
46.3

Major PPT
82.8
0.74
0.9
80.3
37.3

Minor 5ss
23.5
-3.1
3.5
31.6
43.1

Minor BPS
35.1
-1.3
2.5
37.74
39.2

Associated Gene:

Gene:
ZWILCH

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19452232 - 19462783
10552